VIMS 2021 Journal Articles

An alphabetical list of the 212 journal articles authored or co-authored by researchers at the Virginia Institute of Marine Science during 2021 as derived from Scopus©, the world's largest abstract and citation database of peer-reviewed literature. Learn more about the impact of this scholarship in our 2021 media recap.

  1. Allen, S. K., et al., 2021. Genetic parameters for Crassostrea virginica and their application to family-based breeding in the mid-Atlantic, USA. Aquaculture, 538
  2. Allen, T., et al., 2021. Anticipating and adapting to the future impacts of climate change on the health, security and welfare of low elevation coastal zone (LECZ) communities in southeastern USA. Journal of Marine Science and Engineering, 9 (11):
  3. Anderson, B. N., et al., 2021. The Effects of Scallop Dredge Fishing Practices on Physical, Behavioral, and Physiological Stress in Discarded Yellowtail Flounder, Windowpane, and Fourspot Flounder. Marine and Coastal Fisheries, 13 (1): 3-12.
  4. Anderson, D. M., et al., 2021. Marine harmful algal blooms (HABs) in the United States: History, current status and future trends. Harmful Algae, 102
  5. Anstead, K. A., et al., 2021. The Path to an Ecosystem Approach for Forage Fish Management: A Case Study of Atlantic Menhaden. Frontiers in Marine Science, 8
  6. Aoki, L. R., et al., 2021. Seagrass Recovery Following Marine Heat Wave Influences Sediment Carbon Stocks. Frontiers in Marine Science, 7
  7. Arfken, A., et al., 2021. Comparing larval microbiomes of the eastern oyster (Crassostrea virginica) raised in different hatcheries. Aquaculture, 531
  8. Arnold, J. E., et al., 2021. Development of methodology and reference intervals for the analysis of the free-ranging Atlantic horseshoe crab Limulus polyphemus hemolymph. Veterinary Clinical Pathology, 50 (2): 259-272.
  9. Ashey, J. and E. B. Rivest, 2021. Effect of environmental history on the physiology and acute stress response of the eastern oyster Crassostrea virginica. Marine Ecology Progress Series, 674 115-130.
  10. Avolio, M. L., et al., 2021. Determinants of community compositional change are equally affected by global change. Ecology Letters, 24 (9): 1892-1904.
  11. Bangley, C. W., et al., 2021. Environmental associations of cownose ray (Rhinoptera bonasus) seasonal presence along the U.S. Atlantic Coast. Ecosphere, 12 (9):
  12. Barry, S. C., et al., 2021. Variation in Seagrass-Associated Macroinvertebrate Communities Along the Gulf Coast of Peninsular Florida: An Exploration of Patterns and Ecological Consequences. Frontiers in Marine Science, 8
  13. Bates, A. E., et al., 2021. Global COVID-19 lockdown highlights humans as both threats and custodians of the environment. Biological Conservation, 263
  14. Beckensteiner, J., et al., 2021. Environmentally-determined production frontiers and lease utilization in Virginia's eastern oyster aquaculture industry. Aquaculture, 542
  15. Bell, R. J., et al., 2021. Perspectives from the water: Utilizing fisher's observations to inform SNE/MA windowpane science and management. Fisheries Research, 243
  16. Beltran, R. S., et al., 2021. Seasonal resource pulses and the foraging depth of a Southern Ocean top predator. Proceedings of the Royal Society B: Biological Sciences, 288 (1947):
  17. Ben-Horin, T., et al., 2021. Pathogenic Vibrio parahaemolyticus Increase in Intertidal-Farmed Oysters in the Mid-Atlantic Region, but Only at Low Tide. North American Journal of Aquaculture,
  18. Berger, C. A., et al., 2021. De novo transcriptome assembly of the Southern Ocean copepod Rhincalanus gigas sheds light on developmental changes in gene expression. Marine Genomics, 58
  19. Berthold, D. E., et al., 2021. Iningainema tapete sp. nov. (Scytonemataceae, Cyanobacteria) from greenhouses in central Florida (USA) produces two types of nodularin with biosynthetic potential for microcystin-LR and anabaenopeptin production. Harmful Algae, 101
  20. Bever, A. J., et al., 2021. Real-time environmental forecasts of the Chesapeake Bay: Model setup, improvements, and online visualization. Environmental Modelling and Software, 140
  21. Bienlien, L. M., et al., 2021. Impact of parasitism on levels of human-pathogenic Vibrio species in eastern oysters. Journal of Applied Microbiology,
  22. Bilkovic, D. M., et al., 2021. Ribbed mussel Geukensia demissa population response to living shoreline design and ecosystem development. Ecosphere, 12 (3):
  23. Bilkovic, D. M., et al., 2021. Nursery habitat use by juvenile blue crabs in created and natural fringing marshes. Ecological Engineering, 170
  24. Bitter, M. C., et al., 2021. Fluctuating selection and global change: A synthesis and review on disentangling the roles of climate amplitude, predictability and novelty. Proceedings of the Royal Society B: Biological Sciences, 288 (1957):
  25. Bowers, D. G. and J. M. Brubaker, 2021. Providential Tides: the Double Low Water of Narragansett Bay. Estuaries and Coasts, 44 (1): 44-53.
  26. Brewer, P., et al., 2021. Thank You to Our 2020 Reviewers. Journal of Geophysical Research: Oceans, 126 (3):
  27. Cai, X., et al., 2021. Impacts of Sea-Level Rise on Hypoxia and Phytoplankton Production in Chesapeake Bay: Model Prediction and Assessment. Journal of the American Water Resources Association,
  28. Carnegie, R. B., et al., 2021. A rapid phenotype change in the pathogen Perkinsus marinus was associated with a historically significant marine disease emergence in the eastern oyster. Scientific Reports, 11 (1):
  29. Casanova, A., et al., 2021. Low impact of different SNP panels from two building-loci pipelines on RAD-Seq population genomic metrics: case study on five diverse aquatic species. BMC Genomics, 22 (1):
  30. Chambers, R. M., et al., 2021. Comparison of nutrient accrual in constructed living shoreline and natural fringing marshes. Ocean and Coastal Management, 199
  31. Chant, R. J., et al., 2021. Sediment Budget Estimates for a Highly Impacted Embayment with Extensive Wetland Loss. Estuaries and Coasts, 44 (3): 608-626.
  32. Chen, S., et al., 2021. Revisiting the Ocean Color Algorithms for Particulate Organic Carbon and Chlorophyll-a Concentrations in the Ross Sea. Journal of Geophysical Research: Oceans, 126 (8):
  33. Chen, Y., et al., 2021. Thermokarst acceleration in Arctic tundra driven by climate change and fire disturbance. One Earth, 4 (12): 1718-1729.
  34. Cheung, A. H., et al., 2021. Humans dominated biomass burning variations in Equatorial Asia over the past 200 years: Evidence from a lake sediment charcoal record. Quaternary Science Reviews, 253
  35. Chowdhury, M. S. N., et al., 2021. Ecological engineering with oysters enhances coastal resilience efforts. Ecological Engineering, 169
  36. Chowdhury, M. S. N., et al., 2021. Morphological and mitochondrial dna analyses of oysters in the northern bay of bengal, bangladesh. Journal of Shellfish Research, 40 (2): 213-229.
  37. Christensen, N. L., et al., 2021. Ecosystem-based management for military training, biodiversity, carbon storage and climate resiliency on a complex coastal land/water-scape. Journal of Environmental Management, 280
  38. Ciarletta, D. J., et al., 2021. Quantifying thresholds of barrier geomorphic change in a cross-shore sediment-partitioning model. Earth Surface Dynamics, 9 (2): 183-203.
  39. Cloern, J. E., et al., 2021. On the human appropriation of wetland primary production. Science of the Total Environment, 785
  40. Coleman, D. J., et al., 2021. The geomorphic impact of mangrove encroachment in an Australian salt marsh. Estuarine, Coastal and Shelf Science, 251
  41. Conder, J., et al., 2021. Evaluation of a rapid biosensor tool for measuring PAH availability in petroleum-impacted sediment. Environmental Advances, 3
  42. Cui, L., et al., 2021. Formation of Oil-Particle-Aggregates: Numerical Model Formulation and Calibration. Frontiers in Marine Science, 8
  43. Da, F., et al., 2021. Mechanisms Driving Decadal Changes in the Carbonate System of a Coastal Plain Estuary. Journal of Geophysical Research: Oceans, 126 (6):
  44. de Melo, C. M. R., et al., 2021. Introduction and evaluation on the US West Coast of a new strain (Midori) of Pacific oyster (Crassostrea gigas) collected from the Ariake Sea, southern Japan. Aquaculture, 531
  45. DelBene, J. A., et al., 2021. Preferences for derelict gear mitigation strategies by commercial fishers. Marine Policy, 132
  46. Dennison, W. C., et al., 2021. Susan Lynn Williams: the Life of an Exceptional Scholar, Leader, and Friend (1951–2018). Estuaries and Coasts, 44 (2): 304-311.
  47. Dixon, C. M., et al., 2021. Community dynamics under environmental extremes: coastal plain wet prairie in a natural state and under restoration. Plant Ecology, 222 (11): 1251-1262.
  48. Doherty, S. C., et al., 2021. Distinguishing zooplankton fecal pellets as a component of the biological pump using compound-specific isotope analysis of amino acids. Limnology and Oceanography, 66 (7): 2827-2841.
  49. Dong, H., et al., 2021. Transport Barriers and the Retention of Calanus finmarchicus on the Lofoten Shelf in Early Spring. Journal of Geophysical Research: Oceans, 126 (8):
  50. Dukhovskoy, D. S., et al., 2021. Development of the CSOMIO Coupled Ocean-Oil-Sediment- Biology Model. Frontiers in Marine Science, 8
  51. Duran Vinent, O., et al., 2021. Onset of runaway fragmentation of salt marshes. One Earth, 4 (4): 506-516.
  52. Estill, C. F., et al., 2021. Assessment of triphenyl phosphate (TPhP) exposure to nail salon workers by air, hand wipe, and urine analysis. International Journal of Hygiene and Environmental Health, 231
  53. Everson, J. L., et al., 2021. Aquaculture Reuse Water, Genetic Line, and Vaccination Affect Rainbow Trout (Oncorhynchus mykiss) Disease Susceptibility and Infection Dynamics. Frontiers in Immunology, 12
  54. Fabrizio, M. C., et al., 2021. Invasive Blue Catfish in the Chesapeake Bay Region: A Case Study of Competing Management Objectives. North American Journal of Fisheries Management, 41 (S1): S156-S166.
  55. Fabrizio, M. C., et al., 2021. The Extent of Seasonally Suitable Habitats May Limit Forage Fish Production in a Temperate Estuary. Frontiers in Marine Science, 8
  56. Fall, K. A., et al., 2021. The Importance of Organic Content to Fractal Floc Properties in Estuarine Surface Waters: Insights From Video, LISST, and Pump Sampling. Journal of Geophysical Research: Oceans, 126 (1):
  57. FitzGerald, D. M., et al., 2021. Largest marsh in New England near a precipice. Geomorphology, 379
  58. Fleeger, J. W., et al., 2021. A Macroinfaunal Ecosystem Engineer May Facilitate Recovery of Benthic Invertebrates and Accompanying Ecosystem Services After an Oil Spill. Estuaries and Coasts,
  59. Fortin, S. G., et al., 2021. Microbially mediated nitrogen removal and retention in the York River Estuary. FEMS Microbiology Ecology, 97 (9):
  60. Gagnon, K., et al., 2021. Role of food web interactions in promoting resilience to nutrient enrichment in a brackish water eelgrass (Zostera marina) ecosystem. Limnology and Oceanography, 66 (7): 2810-2826.
  61. Gao, C., et al., 2021. Anthropogenic impact on the organic carbon sources, transport and distribution in a subtropical semi-enclosed bay. Science of the Total Environment, 767
  62. Gillen, M. N., et al., 2021. Biophysical controls of marsh soil shear strength along an estuarine salinity gradient. Earth Surface Dynamics, 9 (3): 413-421.
  63. Gloekler, L. E., et al., 2021. A pilot study to characterize hand-to-mouth transfer efficiency of organophosphate flame retardants identified in infant products. Human and Ecological Risk Assessment, 27 (9-10): 2288-2310.
  64. Goñi, M. A., et al., 2021. Particulate Organic Matter Distributions in the Water Column of the Chukchi Sea During Late Summer. Journal of Geophysical Research: Oceans, 126 (9):
  65. Gorman, K. B., et al., 2021. Advancing the Sea Ice Hypothesis: Trophic Interactions Among Breeding Pygoscelis Penguins With Divergent Population Trends Throughout the Western Antarctic Peninsula. Frontiers in Marine Science, 8
  66. Guévélou, E., et al., 2021. Near infrared reflectance spectroscopy to quantify Perkinsus marinus infecting Crassostrea virginica. Aquaculture, 533
  67. Guo, L., et al., 2021. Changjiang Delta in the Anthropocene: Multi-scale hydro-morphodynamics and management challenges. Earth-Science Reviews, 223
  68. Gustafson, L. L., et al., 2021. Optimizing surveillance for early disease detection: Expert guidance for Ostreid herpesvirus surveillance design and system sensitivity calculation. Preventive Veterinary Medicine, 194
  69. Harris, C. M., et al., 2021. Alkali Metal- And Acid-Catalyzed Interconversion of Goniodomin A with Congeners B and C. Journal of Natural Products, 84 (9): 2554-2567.
  70. Hein, C. J., et al., 2021. Leveraging the Interdependencies Between Barrier Islands and Backbarrier Saltmarshes to Enhance Resilience to Sea-Level Rise. Frontiers in Marine Science, 8
  71. Hemeon, K. M., et al., 2021. Attainability of accurate age frequencies for ocean quahogs (arctica islandica) using large datasets: Protocol, reader precision, and error assessment. Journal of Shellfish Research, 40 (2): 255-267.
  72. Hensel, M. J. S., et al., 2021. Feral hogs control brackish marsh plant communities over time. Ecology,
  73. Herbert, E. R., et al., 2021. Sea-level rise enhances carbon accumulation in United States tidal wetlands. One Earth, 4 (3): 425-433.
  74. Hilton, E. J., et al., 2021. A Common Love of Science: The One-Hundredth Meeting of the American Society of Ichthyologists and Herpetologists. Ichthyology and Herpetology, 109 (3): 916-924.
  75. Hilton, E. J., et al., 2021. Redescription of †yanosteus longidorsalis Jin et al. Journal of Paleontology, 95 (1): 170-183.
  76. Hilton, E. J., et al., 2021. Sturgeons (Acipenseridae) from the Late Miocene of Ukraine, with a discussion of materials associated with Widhalm's (1886) nomen nudum, † Acipenser euhuso. Zootaxa, 5057 (3): 385-401.
  77. Hilton, E. J., et al., 2021. The Expanding Role of Natural History Collections. Ichthyology and Herpetology, 109 (2): 379-391.
  78. Himmelstein, J., et al., 2021. Mechanisms of Pond Expansion in a Rapidly Submerging Marsh. Frontiers in Marine Science, 8
  79. Hinson, K. E., et al., 2021. Extent and Causes of Chesapeake Bay Warming. Journal of the American Water Resources Association,
  80. Hood, R. R., et al., 2021. The Chesapeake Bay program modeling system: Overview and recommendations for future development. Ecological Modelling, 456
  81. Hovel, K. A., et al., 2021. Joint effects of patch edges and habitat degradation on faunal predation risk in a widespread marine foundation species. Ecology, 102 (5):
  82. Huang, W., et al., 2021. Compounding factors for extreme flooding around Galveston Bay during Hurricane Harvey. Ocean Modelling, 158
  83. Humphreys, A., et al., 2021. Changes in plant communities of low-salinity tidal marshes in response to sea-level rise. Ecosphere, 12 (7):
  84. Hunt, E. P., et al., 2021. Molecular Phylogenetics of the Chub Suckers (Teleostei: Catostomidae: Erimyzon) Inferred from Nuclear and Mitochondrial Loci. Ichthyology and Herpetology, 109 (2): 626-635.
  85. Hyman, A. C., et al., 2021. Influence of salinity on SAV distribution in a series of intermittently connected coastal lakes. Estuarine, Coastal and Shelf Science, 260
  86. Ingman, K., et al., 2021. Modeling changes in baleen whale seasonal abundance, timing of migration, and environmental variables to explain the sudden rise in entanglements in California. PLoS ONE, 16 (4 April):
  87. Isdell, R. E., et al., 2021. Living shorelines achieve functional equivalence to natural fringe marshes across multiple ecological metrics. PeerJ, 9
  88. Iwaniec, D. M., et al., 2021. Connectivity: insights from the U.S. Long Term Ecological Research Network. Ecosphere, 12 (5):
  89. Jabre, L. J., et al., 2021. Molecular underpinnings and biogeochemical consequences of enhanced diatom growth in a warming Southern Ocean. Proceedings of the National Academy of Sciences of the United States of America, 118 (30):
  90. Jawad, W. A., et al., 2021. A Subtropical Nudibranch, Polycera hummi (Abbott 1952), Described for the First Time from Virginia. Northeastern Naturalist, 28 (2): N15-N23.
  91. Jessen, B. J., et al., 2021. Decomposition of mangrove litter under experimental nutrient loading in a fringe Rhizophora mangle (L.) forest. Estuarine, Coastal and Shelf Science, 248
  92. Jiao, M., et al., 2021. Causes of the extreme drought event in Liaoning Province, China in July–August 2014. Meteorology and Atmospheric Physics, 133 (4): 1355-1365.
  93. Johnson, A. J., et al., 2021. Recovery Dynamics of the Seagrass Zostera marina Following Mass Mortalities from Two Extreme Climatic Events. Estuaries and Coasts, 44 (2): 535-544.
  94. Jordan-Cooley, W. C., et al., 2021. Corrigendum to “Bistability in a differential equation model of oyster reef height and sediment accumulation” (J. Theor. Biol. (2011) 289 (1–11), (S0022519311004085), (10.1016/j.jtbi.2011.08.013)). Journal of Theoretical Biology, 525
  95. Kamalanathan, M., et al., 2021. Molecular mechanism of oil induced growth inhibition in diatoms using Thalassiosira pseudonana as the model species. Scientific Reports, 11 (1):
  96. Karnjanapak, C., et al., 2021. Rhodomonas PE545 fluorescence is increased by glycerol. ScienceAsia, 47 (4): 469-477.
  97. Killberg-Thoreson, L., et al., 2021. Seasonal Nitrogen Uptake Dynamics and Harmful Algal Blooms in the York River, Virginia. Estuaries and Coasts, 44 (3): 750-768.
  98. Kim, H. H., et al., 2021. WAP-1D-VAR v1.0: Development and evaluation of a one-dimensional variational data assimilation model for the marine ecosystem along the West Antarctic Peninsula. Geoscientific Model Development, 14 (8): 4939-4975.
  99. Kim, J., et al., 2021. Reconstructing primary production in a changing estuary: A mass balance modeling approach. Limnology and Oceanography, 66 (6): 2535-2546.
  100. Kinard, S., et al., 2021. Effects of a natural precipitation gradient on fish and macroinvertebrate assemblages in coastal streams. PeerJ, 9
  101. Knobloch, A. L. J., et al., 2021. Carbon Pools Differ in Source and Temporal Patterns in a Tidal Marsh Creek System of the York River, VA Estuary. Estuaries and Coasts, 44 (7): 1848-1865.
  102. Langston, A. K., et al., 2021. Beyond 2100: Elevation capital disguises salt marsh vulnerability to sea-level rise in Georgia, USA. Estuarine, Coastal and Shelf Science, 249
  103. Langston, A. K., et al., 2021. The Effect of Marsh Age on Ecosystem Function in a Rapidly Transgressing Marsh. Ecosystems,
  104. Lesser, J. S., et al., 2021. Cross-habitat access modifies the ‘trophic relay’ in New England saltmarsh ecosystems. Food Webs, 29
  105. Li, D., et al., 2021. Seasonal Variations and Driving Factors of the Eastern Maine Coastal Current. Journal of Geophysical Research: Oceans, 126 (11):
  106. Li, M., et al., 2021. Astronomical tide and storm surge signals observed in an isolated inland maar lake near the coast. Journal of Marine Science and Engineering, 9 (5):
  107. Li, Y., et al., 2021. A dynamic biomass model of emergent aquatic vegetation under different water levels and salinity. Ecological Modelling, 440
  108. Lin, X., et al., 2021. Membrane inlet mass spectrometry method (REOX/MIMS) to measure 15N-nitrate in isotope-enrichment experiments. Ecological Indicators, 126
  109. Lipcius, R. N., et al., 2021. Modeling Oyster Reef Restoration: Larval Supply and Reef Geometry Jointly Determine Population Resilience and Performance. Frontiers in Marine Science, 8
  110. Longmire, K. S., et al., 2021. Saved by the shell: Oyster reefs can shield juvenile blue crabs Callinectes sapidus. Marine Ecology Progress Series, 672 163-173.
  111. López, A. G., et al., 2021. Estuaries as Filters for Riverine Microplastics: Simulations in a Large, Coastal-Plain Estuary. Frontiers in Marine Science, 8
  112. Maas, A. E., et al., 2021. Allometry and the calculation of zooplankton metabolism in the subarctic Northeast Pacific Ocean. Journal of Plankton Research, 43 (3): 413-427.
  113. Macías-Tapia, A., et al., 2021. Effects of tidal flooding on estuarine biogeochemistry: Quantifying flood-driven nitrogen inputs in an urban, lower Chesapeake Bay sub-tributary. Water Research, 201
  114. Mann, R., 2021. An ecosystem is not a monument, and other challenges to fishing in the 21stcentury. Journal of Shellfish Research, 40 (2): 185-190.
  115. Marion, S. R., et al., 2021. Correction to: Seed Burial Alleviates Wave Energy Constraints on Zostera marina (Eelgrass) Seedling Establishment at Restoration-Relevant Scales (Estuaries and Coasts, (2021), 44, 2, (352-366), 10.1007/s12237-020-00832-y). Estuaries and Coasts, 44 (2): 578.
  116. Marion, S. R., et al., 2021. Seed Burial Alleviates Wave Energy Constraints on Zostera marina (Eelgrass) Seedling Establishment at Restoration-Relevant Scales. Estuaries and Coasts, 44 (2): 352-366.
  117. Martin, J. M. and E. J. Hilton, 2021. A taxonomic review of the family Trachipteridae (Acanthomorpha: Lampridiformes), with an emphasis on taxa distributed in the western Pacific Ocean. Zootaxa, 5039 (3): 301-351.
  118. Matt, J. L. and S. K. Allen, 2021. A classification system for gonad development in triploid Crassostrea virginica. Aquaculture, 532
  119. Messerschmidt, T. C., et al., 2021. Asymmetric root distributions reveal press–pulse responses in retreating coastal forests. Ecology, 102 (10):
  120. Michaelis, A. K., et al., 2021. Cultural ecosystem services enabled through work with shellfish. Marine Policy, 132
  121. Millette, N. C., et al., 2021. Temporal and spatial variability of phytoplankton and mixotrophs in a temperate estuary. Marine Ecology Progress Series, 677 17-31.
  122. Mitchell, M., et al., 2021. Impact Assessment and Management Challenges of Key Rural Human Health Infrastructure Under Sea Level Rise. Frontiers in Marine Science, 8
  123. Moriarty, J. M., et al., 2021. Seabed Resuspension in the Chesapeake Bay: Implications for Biogeochemical Cycling and Hypoxia. Estuaries and Coasts, 44 (1): 103-122.
  124. Morris, R. L., et al., 2021. Large-scale variation in wave attenuation of oyster reef living shorelines and the influence of inundation duration. Ecological Applications, 31 (6):
  125. Murphy, C. E., et al., 2021. Habitat Primarily Structures Seagrass Epifaunal Communities: a Regional-Scale Assessment in the Chesapeake Bay. Estuaries and Coasts, 44 (2): 442-452.
  126. Nardelli, S. C., et al., 2021. Krill availability in adjacent Adélie and gentoo penguin foraging regions near Palmer Station, Antarctica. Limnology and Oceanography, 66 (6): 2234-2250.
  127. Nepal, V. and M. C. Fabrizio, 2021. Reproductive Characteristics Differ in Two Invasive Populations of Blue Catfish. North American Journal of Fisheries Management, 41 (S1): S180-S194.
  128. Nepal, V., et al., 2021. Effects of food limitation on growth, body condition and metabolic rates of non-native blue catfish. Conservation Physiology, 9 (1):
  129. Nittrouer, C. A., et al., 2021. Amazon Sediment Transport and Accumulation along the Continuum of Mixed Fluvial and Marine Processes. Annual Review of Marine Science, 13 501-536.
  130. Norgaard, R. B., et al., 2021. Preparing Scientists, Policy-Makers, and Managers for a Fast-Forward Future. San Francisco Estuary and Watershed Science, 19 (2): 1-22.
  131. Norwood, M. J., et al., 2021. Coastal Forest Seawater Exposure Increases Stem Methane Concentration. Journal of Geophysical Research: Biogeosciences, 126 (2):
  132. Nunez, K., et al., 2021. Coastal setting determines tidal marsh sustainability with accelerating sea-level rise. Ocean and Coastal Management, 214
  133. Oliver, H., et al., 2021. Diatom Hotspots Driven by Western Boundary Current Instability. Geophysical Research Letters, 48 (11):
  134. Omand, M. M., et al., 2021. Cloud shadows drive vertical migrations of deep-dwelling marine life. Proceedings of the National Academy of Sciences of the United States of America, 118 (32):
  135. Omori, K. L., et al., 2021. Methods for Identifying Species Complexes Using a Novel Suite of Multivariate Approaches and Multiple Data Sources: A Case Study With Gulf of Alaska Rockfish. Frontiers in Marine Science, 8
  136. Onofrio, M. D., et al., 2021. Spatiotemporal distribution of phycotoxins and their co-occurrence within nearshore waters. Harmful Algae, 103
  137. Oreska, M. P. J., et al., 2021. Defining the Zostera marina (Eelgrass) Niche from Long-Term Success of Restored and Naturally Colonized Meadows: Implications for Seagrass Restoration. Estuaries and Coasts, 44 (2): 396-411.
  138. Orth, R. J. and K. L. Heck, 2021. Correction to: Seagrasses—a Tribute to Dr. Susan Williams (Estuaries and Coasts, (2021), 44, 2, (303), 10.1007/s12237-020-00885-z). Estuaries and Coasts, 44 (2): 577.
  139. Orth, R. J. and K. L. Heck, 2021. Seagrasses—a Tribute to Dr. Susan Williams. Estuaries and Coasts, 44 (2): 303.
  140. Ottinger, C. A., et al., 2021. Production and characterization of a mouse monoclonal antibody against smallmouth bass (Micropterus dolomieu) IgM. Fish and Shellfish Immunology, 113 20-23.
  141. Pan, S., et al., 2021. Impacts of Multiple Environmental Changes on Long-Term Nitrogen Loading From the Chesapeake Bay Watershed. Journal of Geophysical Research: Biogeosciences, 126 (5):
  142. Patrick, C. J., et al., 2021. The application of metacommunity theory to the management of riverine ecosystems. Wiley Interdisciplinary Reviews: Water, 8 (6):
  143. Patrick, C. J., et al., 2021. Multi-scale biodiversity drives temporal variability in macrosystems. Frontiers in Ecology and the Environment, 19 (1): 47-56.
  144. Pease, S. K. D., et al., 2021. Oyster hatchery breakthrough of two HABs and potential effects on larval eastern oysters (Crassostrea virginica). Harmful Algae, 101
  145. Peterson, C. D., et al., 2021. Reconciling conflicting survey indices of abundance prior to stock assessment. ICES Journal of Marine Science, 78 (9): 3101-3120.
  146. Peterson, C. D., et al., 2021. Dynamic factor analysis to reconcile conflicting survey indices of abundance. ICES Journal of Marine Science, 78 (5): 1711-1729.
  147. Pinsonneault, A. J., et al., 2021. Dissolved organic carbon sorption dynamics in tidal marsh soils. Limnology and Oceanography, 66 (1): 214-225.
  148. Powell, E. N., et al., 2021. The conundrum of biont-free substrates on a high-energy continental shelf: Burial and scour on Nantucket Shoals, Great South Channel. Estuarine, Coastal and Shelf Science, 249
  149. Qin, Q. and J. Shen, 2021. Typical relationships between phytoplankton biomass and transport time in river-dominated coastal aquatic systems. Limnology and Oceanography, 66 (8): 3209-3220.
  150. Qin, Q. and J. Shen, 2021. Applying transport rate for quantifying local transport conditions in estuarine and coastal systems. Journal of Marine Systems, 218
  151. Qin, Q., et al., 2021. Developing a 3D mechanistic model for examining factors contributing to harmful blooms of Margalefidinium polykrikoides in a temperate estuary. Harmful Algae, 105
  152. Ray, N. E., et al., 2021. A review of how we assess denitrification in oyster habitats and proposed guidelines for future studies. Limnology and Oceanography: Methods, 19 (10): 714-731.
  153. Ren, J., et al., 2021. The role of a remote tropical cyclone in sediment resuspension over the subaqueous delta front in the Changjiang Estuary, China. Geomorphology, 377
  154. Rietl, A. J., et al., 2021. Vegetation Type and Decomposition Priming Mediate Brackish Marsh Carbon Accumulation Under Interacting Facets of Global Change. Geophysical Research Letters, 48 (8):
  155. Roa-Varón, A., et al., 2021. Confronting Sources of Systematic Error to Resolve Historically Contentious Relationships: A Case Study Using Gadiform Fishes (Teleostei, Paracanthopterygii, Gadiformes). Systematic biology, 70 (4): 739-755.
  156. Rose, J. M., et al., 2021. Opportunities and Challenges for Including Oyster-Mediated Denitrification in Nitrogen Management Plans. Estuaries and Coasts, 44 (8): 2041-2055.
  157. Ryan-Keogh, T. J. and W. O. Smith, 2021. Temporal patterns of iron limitation in the Ross Sea as determined from chlorophyll fluorescence. Journal of Marine Systems, 215
  158. Saba, G. K., et al., 2021. Toward a better understanding of fish-based contribution to ocean carbon flux. Limnology and Oceanography, 66 (5): 1639-1664.
  159. Scavia, D., et al., 2021. Advancing estuarine ecological forecasts: seasonal hypoxia in Chesapeake Bay. Ecological Applications, 31 (6):
  160. Scheld, A. M., et al., 2021. Evaluating optimal removal of derelict blue crab pots in Virginia, US. Ocean and Coastal Management, 211
  161. Scherrer, S. R., et al., 2021. Estimation of growth parameters integrating tag-recapture, length-frequency, and direct aging data using likelihood and Bayesian methods for the tropical deepwater snapper Pristipomoides filamentosus in Hawaii. Fisheries Research, 233
  162. Schwieterman, G. D., et al., 2021. A lack of red blood cell swelling in five elasmobranch fishes following air exposure and exhaustive exercise. Comparative Biochemistry and Physiology -Part A : Molecular and Integrative Physiology, 258
  163. Schwieterman, G. D., et al., 2021. The effects of elevated potassium, acidosis, reduced oxygen levels, and temperature on the functional properties of isolated myocardium from three elasmobranch fishes: clearnose skate (Rostroraja eglanteria), smooth dogfish (Mustelus canis), and sandbar shark (Carcharhinus plumbeus). Journal of Comparative Physiology B: Biochemical, Systemic, and Environmental Physiology, 191 (1): 127-141.
  164. Shadwick, E. H., et al., 2021. Sea Ice Suppression of CO2 Outgassing in the West Antarctic Peninsula: Implications For The Evolving Southern Ocean Carbon Sink. Geophysical Research Letters, 48 (11):
  165. Shawler, J. L., et al., 2021. Relative influence of antecedent topography and sea-level rise on barrier-island migration. Sedimentology, 68 (2): 639-669.
  166. Shawler, J. L., et al., 2021. The effect of coastal landform development on decadal-to millennial-scale longshore sediment fluxes: Evidence from the Holocene evolution of the central mid-Atlantic coast, USA. Quaternary Science Reviews, 267
  167. Shen, X., et al., 2021. A quasi-Monte Carlo based flocculation model for fine-grained cohesive sediments in aquatic environments. Water Research, 194
  168. Shields, J. D. and J. P. Huchin-Mian, 2021. Ecological factors in the emergence of pathogens in commercially important crustaceans.
  169. Siegel, D. A., et al., 2021. An operational overview of the EXport processes in the ocean from RemoTe sensing (EXPORTS) northeast pacific field deployment. Elementa, 9 (1):
  170. Smith, A. J. and E. M. Goetz, 2021. Climate change drives increased directional movement of landscape ecotones. Landscape Ecology, 36 (11): 3105-3116.
  171. Smith, A. J. and M. L. Kirwan, 2021. Sea Level-Driven Marsh Migration Results in Rapid Net Loss of Carbon. Geophysical Research Letters, 48 (13):
  172. Smith, W. O., et al., 2021. A Regional, Early Spring Bloom of Phaeocystis pouchetii on the New England Continental Shelf. Journal of Geophysical Research: Oceans, 126 (2):
  173. Snyder, R. A., et al., 2021. Ciliate microzooplankton from the Northeastern Gulf of Mexico. ICES Journal of Marine Science, 78 (9): 3356-3371.
  174. Song, J. and J. R. McDowell, 2021. Comparative transcriptomics of spotted seatrout (Cynoscion nebulosus) populations to cold and heat stress. Ecology and Evolution, 11 (3): 1352-1367.
  175. Stamieszkin, K., et al., 2021. Fecal pellet production by mesozooplankton in the subarctic Northeast Pacific Ocean. Limnology and Oceanography, 66 (7): 2585-2597.
  176. Strain, E. M. A., et al., 2021. A global analysis of complexity–biodiversity relationships on marine artificial structures. Global Ecology and Biogeography, 30 (1): 140-153.
  177. Torstensson, A., et al., 2021. Sea-ice microbial communities in the Central Arctic Ocean: Limited responses to short-term pCO2 perturbations. Limnology and Oceanography, 66 (S1): S383-S400.
  178. Tuckey, T. D., et al., 2021. Penaeid Shrimp in Chesapeake Bay: Population Growth and Black Gill Disease Syndrome. Marine and Coastal Fisheries, 13 (3): 159-173.
  179. Turner, J. S., et al., 2021. Effects of reduced shoreline erosion on Chesapeake Bay water clarity. Science of the Total Environment, 769
  180. Vachula, R. S., 2021. A meta-analytical approach to understanding the charcoal source area problem. Palaeogeography, Palaeoclimatology, Palaeoecology, 562
  181. Vachula, R. S. and A. H. Cheung, 2021. Late Neogene surge in sedimentary charcoal fluxes partly due to preservation biases, not fire activity. Palaeogeography, Palaeoclimatology, Palaeoecology, 567
  182. Vachula, R. S., et al., 2021. A critical appraisal of charcoal morphometry as a paleofire fuel type proxy. Quaternary Science Reviews, 262
  183. Valentine, K., et al., 2021. Brackish marshes erode twice as fast as saline marshes in the Mississippi Delta region. Earth Surface Processes and Landforms, 46 (9): 1739-1749.
  184. van Putten, I., et al., 2021. A Decade of Incorporating Social Sciences in the Integrated Marine Biosphere Research Project (IMBeR): Much Done, Much to Do? Frontiers in Marine Science, 8
  185. Wang, C., et al., 2021. Different coastal marsh sites reflect similar topographic conditions under which bare patches and vegetation recovery occur. Earth Surface Dynamics, 9 (1): 71-88.
  186. Wang, F., et al., 2021. Global blue carbon accumulation in tidal wetlands increases with climate change. National Science Review, 8 (9):
  187. Wang, Q., et al., 2021. Discrimination of Biomass-Burning Smoke From Clouds Over the Ocean Using MODIS Measurements. IEEE Transactions on Geoscience and Remote Sensing,
  188. Wang, X. and W. O. Smith, 2021. Phytoplankton growth at low temperatures: Results from low temperature incubations. Journal of Plankton Research, 43 (5): 633-641.
  189. Wang, Z., et al., 2021. Light Regulation of Phytoplankton Growth in San Francisco Bay Studied Using a 3D Sediment Transport Model. Frontiers in Marine Science, 8
  190. Wargo, A. R., et al., 2021. Virus shedding kinetics and unconventional virulence tradeoffs. PLoS Pathogens, 17 (5):
  191. Wehmiller, J. F., et al., 2021. Molluscan aminostratigraphy of the US Mid-Atlantic Quaternary coastal system: Implications for onshore-offshore correlation, paleochannel and barrier island evolution, and local late Quaternary sea-level history. Quaternary Geochronology, 66
  192. Weissman, A., et al., 2021. Determining Discard Mortality of Monkfish in a Sea Scallop Dredge Fishery. North American Journal of Fisheries Management, 41 (3): 856-870.
  193. Werrell, A. K., et al., 2021. A Sonic Net reduces damage to sunflower by blackbirds (Icteridae): Implications for broad-scale agriculture and crop establishment. Crop Protection, 144
  194. White, S. B. and A. M. Scheld, 2021. Characterizing Changes in Participation and Diversification in Small-Scale Fisheries of Virginia, USA. Coastal Management,
  195. Wilson, S. J., et al., 2021. Determining Chemical Factors Controlling Abiotic Codenitrification. ACS Earth and Space Chemistry, 5 (2): 186-196.
  196. Wittyngham, S. S., 2021. Salinity and Simulated Herbivory Influence Spartina alterniflora Traits and Defense Strategy. Estuaries and Coasts, 44 (4): 1183-1192.
  197. Wittyngham, S. S., et al., 2021. Biotic Recovery Following Ice-Rafting in a Salt Marsh. Estuaries and Coasts,
  198. Woodland, R. J., et al., 2021. Environmental Drivers of Forage Fishes and Benthic Invertebrates at Multiple Spatial Scales in a Large Temperate Estuary. Estuaries and Coasts, 44 (4): 921-938.
  199. Wu, J., et al., 2021. Microbial nitrogen loss by coupled nitrification to denitrification and anammox in a permeable subterranean estuary at Gloucester Point, Virginia. Marine Pollution Bulletin, 168
  200. Xiong, J., et al., 2021. Exchange Flow and Material Transport Along the Salinity Gradient of a Long Estuary. Journal of Geophysical Research: Oceans, 126 (5):
  201. Xiong, J., et al., 2021. Water exchange and its relationships with external forcings and residence time in Chesapeake Bay. Journal of Marine Systems, 215
  202. Xu, H., et al., 2021. Nonlinearity of Subtidal Estuarine Circulation in the Pearl River Estuary, China. Frontiers in Marine Science, 8
  203. Xu, X., et al., 2021. Tidal Freshwater Zones as Hotspots for Biogeochemical Cycling: Sediment Organic Matter Decomposition in the Lower Reaches of Two South Texas Rivers. Estuaries and Coasts, 44 (3): 722-733.
  204. Yang, H., et al., 2021. Sperm repository for a breeding program of the eastern oyster crassostrea virginica: Sample collection, processing, cryopreservation, and data management plan. Animals, 11 (10):
  205. Yao, Y., et al., 2021. Contrasting stream water temperature responses to global change in the Mid-Atlantic Region of the United States: A process-based modeling study. Journal of Hydrology, 601
  206. Yao, Y., et al., 2021. Riverine Carbon Cycling Over the Past Century in the Mid-Atlantic Region of the United States. Journal of Geophysical Research: Biogeosciences, 126 (5):
  207. Ye, F., et al., 2021. A cross-scale study for compound flooding processes during Hurricane Florence. Natural Hazards and Earth System Sciences, 21 (6): 1703-1719.
  208. Ye, J., et al., 2021. IgM-bearing B cell affinity subpopulations possess differential antigen sensitivity in rainbow trout. Fish and Shellfish Immunology, 118 111-118.
  209. Yu, X. and J. Shen, 2021. A data-driven approach to simulate the spatiotemporal variations of chlorophyll-a in Chesapeake Bay. Ocean Modelling, 159
  210. Yu, X., et al., 2021. An inverse approach to estimate bacterial loading into an estuary by using field observations and residence time. Marine Environmental Research, 166
  211. Zhang, Y. J., 2021. Assessment of subgrid method in a finite-volume model. Computers and Mathematics with Applications, 81 220-236.
  212. Zwollo, P., et al., 2021. Polystyrene microplastics reduce abundance of developing B cells in rainbow trout (Oncorhynchus mykiss) primary cultures. Fish and Shellfish Immunology, 114 102-111.